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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891635.1_cds_XP_016446481.1_41330
CDS Infomation

[gene=LOC107771586] [db_xref=GeneID:107771586] [protein=proline-rich receptor-like protein kinase PERK4 isoform X2] [protein_id=XP_016446481.1] [location=complement(join(16066..16347,17176..17337,17833..17980,18714..18790,18935..19005,19151..19237,19697..20158,20456..21248))] [gbkey=CDS]
Sequence

ATGGACAATTCTCCTTCATCTTCTCCTCCTTCACCGCCTTCGTCTTCTCCTCCTCCTCCA
GAGTCTTCTCCTCCTCCGTCTTCGCCTCCTCCTTCATCTTCTCCTCCTCCTCCTCCTGAT
TCTTCACCTCCTCCTCCTTCTTCTTCTCCTCCTCCTTCTTCACCTCCTCCCTCTTCACCT
CCTCCTTCTTCACCACCGCCCCCATCTCCTGAAGCGCCACCGTCGAAATCTGACAATTCT
CCTTCCCCTCCATCCCCTGAAACACCACCACCGAAATCTGATTCTCCTCCTCCAGCGTCA
CCACCACCTCCTACAGAATCTCCTCCGCCACCACACACAGAGTCTCCTCCACCACCGAAA
TCTGATTCTCCTCCTCCTCCTTCTGATACACCTACGGAATCACCACCACCCTCACCGCCA
CCACCCACCACGAACACAACACCCCCTCCTCCCAAAAATGCCTCAACTACTCAACCTAAT
TCTCCTCCATCGCCTATATTCTCTCCACCACCTCCTGTTTCTCTACAATCACCTCTACCT
CCTCCTGAAAAGTTAATTCCTCCTCCACTTTCTCCACCTTCGCGAGATGCACCGTCGAAT
AAATCACATGGTTCCTCAGGAAGCAATAACTGGCCACCATCTAATAATTCCTCATCTACC
TCAAATGTGGTAATAGTAGCTGCAATAGCTGTGGCAGGTTTATTGATTCTTGCACTTGTC
ATTGTCTGCCTATTATGCAATAGAAAGAAGAAGAAACAACCTTACTATGTAGATCCTGCT
CGTCCACCTCAAGGTGTAATGGGAACTCCTCTAGAAGGACCACGCGGGTGGGCCCCGCCG
CCACCGCCTCCGGCCGCTAACACGAGCAGTGAATATAGCTCAGGTTATTCAAGCCATGTG
CCTGGGGGCCCAATCCCACCAAAATCACCTAATCTTGGTGGACTTGCAAAAATTCAGTTT
ACTTATGAGGACTTAGCAACAGCAACAGGTGGATTTTCTCAAGCCAATTTGTTAGGACAA
GGAGGATTTGGGTTTGTACACAAAGGTATTTTGACTGATGGAAGTATTGTTGCTGTAAAG
AGTTTGAAATCTGGAAGTGGACAAGGTGAAAGAGAATTTCAAGCTGAGGTTGAGATTATT
AGCAGAGTTCATCATAGACATCTTGTTTCTCTTGTTGGATTTTGCATTGCTGATGGACAA
AGAATGTTGGTCTATGAATTTGTTCCCAATGGAACCTTGGAGTTTCATCTTCATGGCAAA
GGTCGACCTGTCATGGATTGGGAAACAAGGCTTAAAATTGCGTTGGGATCAGCCAAGGGA
CTGGCTTACCTTCACGAAGATTGTCATCCTCGCATTATCCACCGTGACATCAAGGCTGCA
AACATTCTACTTGATAACAATTATGAAGCTATGGTGGCAGATTTTGGATTGGCTAAACTT
ACAGAAGACACCAATACTCATGTGTCGACCCGTGTTATGGGAACTTTTGGGTACTTAGCG
CCAGAATATGCATCAAGTGGTAAGCTAACAGAAAAATCAGATGTGTTTTCGTTTGGAGTC
ATGCTTTTGGAACTCATAACAGGGAGGAGACCTCTGGATACTACCAATAAACTCATGGAA
GACTGCCTAGTAGACTGGGCTAGACCCTTTCTTGCAAAAGCATTGGAAGAAAATCAATAC
GATAAATTGGTAGACGCGCGACTAGAAGGAAAATTTGATCCCGATGAGCTGCATCGGATG
GTAGCTTGTGCTGCTGCTAGCGTTCGCCATTCTGCTAAAAGACGTCCAAGAATGAGCCAG
ATAGTACGTGCCTTGGATGGTGATTCATCATTGGAGGACTTGAATGAAAAACCTGGCAAA
AATACAGCTAACTTTGGCAATGGGGCGGCATCTGATATTTACGATACTCGTGCATACAAT
GCTGATATGATGAAGTTTAGGCAAATGGTAATGACAAGCCAAGACTTCAACAGCAGTGAA
TATGGAGCTACAAGTGATTATGGACTCAATCCTTCTTCCTCAAGCAGTGAATTCAGTTCT
GAGTATGGTAATTCAGGAGGCCACCAAAAGCAAACAAAATGA

Peptide Sequence

PEP ID

XP_016446481.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK4 isoform X2 [Nicotiana tabacum]
Sequence

MDNSPSSSPPSPPSSSPPPPESSPPPSSPPPSSSPPPPPDSSPPPPSSSPPPSSPPPSSP
PPSSPPPPSPEAPPSKSDNSPSPPSPETPPPKSDSPPPASPPPPTESPPPPHTESPPPPK
SDSPPPPSDTPTESPPPSPPPPTTNTTPPPPKNASTTQPNSPPSPIFSPPPPVSLQSPLP
PPEKLIPPPLSPPSRDAPSNKSHGSSGSNNWPPSNNSSSTSNVVIVAAIAVAGLLILALV
IVCLLCNRKKKKQPYYVDPARPPQGVMGTPLEGPRGWAPPPPPPAANTSSEYSSGYSSHV
PGGPIPPKSPNLGGLAKIQFTYEDLATATGGFSQANLLGQGGFGFVHKGILTDGSIVAVK
SLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGFCIADGQRMLVYEFVPNGTLEFHLHGK
GRPVMDWETRLKIALGSAKGLAYLHEDCHPRIIHRDIKAANILLDNNYEAMVADFGLAKL
TEDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPLDTTNKLME
DCLVDWARPFLAKALEENQYDKLVDARLEGKFDPDELHRMVACAAASVRHSAKRRPRMSQ
IVRALDGDSSLEDLNEKPGKNTANFGNGAASDIYDTRAYNADMMKFRQMVMTSQDFNSSE
YGATSDYGLNPSSSSSEFSSEYGNSGGHQKQTK

Transcript Sequence

Gene sequence data has not been registered.